{"id":1152,"date":"2022-11-03T09:20:57","date_gmt":"2022-11-03T16:20:57","guid":{"rendered":"https:\/\/www.hmc.edu\/cs\/?p=1152"},"modified":"2025-12-03T10:22:52","modified_gmt":"2025-12-03T18:22:52","slug":"rohan-subramanian-first-author-paper","status":"publish","type":"post","link":"https:\/\/www.hmc.edu\/cs\/2022\/11\/03\/rohan-subramanian-first-author-paper\/","title":{"rendered":"Rohan Subramanian First-Author Paper"},"content":{"rendered":"\n<p>The CS Department is excited to share Rohan&#8217;s hard work!<\/p>\n\n\n\n<p>Rohan Subramanian &#8217;25 and Prof. Debashis Sahoo at the University of California San Diego published&nbsp;&#8220;Boolean implication analysis of single-cell data predicts retinal cell type markers&#8221;, based on his work in Summer 2022. The paper describes a new approach for analyzing single-cell data using asymmetric boolean rules rather than symmetric correlation metrics. A study on retinal data shows improved prediction accuracy of marker genes of retinal cell types and discovers several new high-confidence cone and rod-specific genes.<\/p>\n\n\n\n<p>The paper is open access for all to read and can be found published in <em><a href=\"https:\/\/bmcbioinformatics.biomedcentral.com\/articles\/10.1186\/s12859-022-04915-4\">BMC Bioinformatics<\/a><\/em>.<\/p>\n\n\n\n<figure class=\"wp-block-image size-large\"><img loading=\"lazy\" decoding=\"async\" width=\"1024\" height=\"740\" src=\"https:\/\/www.hmc.edu\/cs\/wp-content\/uploads\/sites\/65\/2022\/11\/PXL_20220624_020530660_edited-1-1024x740.jpg\" alt=\"\" class=\"wp-image-1159\" srcset=\"https:\/\/www.hmc.edu\/cs\/wp-content\/uploads\/sites\/65\/2022\/11\/PXL_20220624_020530660_edited-1-1024x740.jpg 1024w, https:\/\/www.hmc.edu\/cs\/wp-content\/uploads\/sites\/65\/2022\/11\/PXL_20220624_020530660_edited-1-300x217.jpg 300w, https:\/\/www.hmc.edu\/cs\/wp-content\/uploads\/sites\/65\/2022\/11\/PXL_20220624_020530660_edited-1-768x555.jpg 768w, https:\/\/www.hmc.edu\/cs\/wp-content\/uploads\/sites\/65\/2022\/11\/PXL_20220624_020530660_edited-1.jpg 1366w\" sizes=\"auto, (max-width: 1024px) 100vw, 1024px\" \/><\/figure>\n\n\n\n<p>PI&#8217;s lab group.<\/p>\n","protected":false},"excerpt":{"rendered":"<p>The CS Department is excited to share Rohan&#8217;s hard work! Rohan Subramanian &#8217;25 and Prof. Debashis Sahoo at the University [&hellip;]<\/p>\n","protected":false},"author":312,"featured_media":2358,"comment_status":"open","ping_status":"open","sticky":false,"template":"","format":"standard","meta":{"_acf_changed":false,"footnotes":""},"categories":[12],"tags":[13,10,11,15,14,16],"class_list":["post-1152","post","type-post","status-publish","format-standard","has-post-thumbnail","hentry","category-student","tag-computational-biology","tag-computer-science","tag-cs","tag-research","tag-student","tag-student-paper"],"acf":[],"_links":{"self":[{"href":"https:\/\/www.hmc.edu\/cs\/wp-json\/wp\/v2\/posts\/1152","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/www.hmc.edu\/cs\/wp-json\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/www.hmc.edu\/cs\/wp-json\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/www.hmc.edu\/cs\/wp-json\/wp\/v2\/users\/312"}],"replies":[{"embeddable":true,"href":"https:\/\/www.hmc.edu\/cs\/wp-json\/wp\/v2\/comments?post=1152"}],"version-history":[{"count":4,"href":"https:\/\/www.hmc.edu\/cs\/wp-json\/wp\/v2\/posts\/1152\/revisions"}],"predecessor-version":[{"id":2045,"href":"https:\/\/www.hmc.edu\/cs\/wp-json\/wp\/v2\/posts\/1152\/revisions\/2045"}],"wp:featuredmedia":[{"embeddable":true,"href":"https:\/\/www.hmc.edu\/cs\/wp-json\/wp\/v2\/media\/2358"}],"wp:attachment":[{"href":"https:\/\/www.hmc.edu\/cs\/wp-json\/wp\/v2\/media?parent=1152"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/www.hmc.edu\/cs\/wp-json\/wp\/v2\/categories?post=1152"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/www.hmc.edu\/cs\/wp-json\/wp\/v2\/tags?post=1152"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}