{"id":945,"date":"2015-08-24T11:36:31","date_gmt":"2015-08-24T18:36:31","guid":{"rendered":"https:\/\/www.hmc.edu\/biology\/?page_id=945"},"modified":"2015-08-24T11:36:31","modified_gmt":"2015-08-24T18:36:31","slug":"mcfadden-complete-publication-list","status":"publish","type":"page","link":"https:\/\/www.hmc.edu\/biology\/faculty-staff\/mcfadden\/mcfadden-complete-publication-list\/","title":{"rendered":"McFadden Complete Publication List"},"content":{"rendered":"

McFadden CS<\/strong>, McFarland MJ, Buss LW (1984) Biology of Hydractiniid hydroids. 1. Colony ontogeny in Hydractinia echinata<\/em> (Flemming). Biological Bulletin<\/em> 166: 54\u201167.<\/p>\n

Buss LW, CS McFadden<\/strong>, Keene DR (1984) Biology of Hydractiniid hydroids. 2. Histocompatibility effector system\/competitive mechanism mediated by nematocyst discharge. Biological Bulletin<\/em> 167: 139\u2011158.<\/p>\n

McFadden CS<\/strong> (1986) Laboratory evidence for a size refuge in competitive interactions between the hydroids Hydractinia echinata<\/em> (Flemming) and Podocoryne carnea<\/em> (Sars). Biological Bulletin<\/em> 171: 161\u2011174.<\/p>\n

McFadden CS<\/strong> (1986) Colony fission increases particle capture rates of a soft coral: advantages of being a small colony. Journal of Experimental Marine Biology and Ecology<\/em> 103: 1\u201120.<\/p>\n

McFadden CS<\/strong> (1991) A comparative demographic analysis of clonal reproduction in a temperate soft coral. Ecology<\/em> 72: 1849\u20111866.<\/p>\n

McFadden CS, <\/strong>Aydin KY* (1996) Spatial autocorrelation analysis of small-scale genetic structure in a clonal soft coral with limited larval dispersal. Marine Biology<\/em> 126: 215-224.<\/p>\n

McFadden CS<\/strong> (1997) Contributions of sexual and asexual reproduction to population structure in the clonal soft coral, Alcyonium rudyi<\/em>. Evolution<\/em> 51: 112-126.<\/p>\n

McFadden CS<\/strong>, Grosberg RK, Cameron BB, Karlton DP*, Secord D (1997) Genetic relationships within and between clonal and solitary forms of the sea anemone Anthopleura elegantissima<\/em> revisited: evidence for the existence of two species. Marine Biology<\/em> 128: 127-139.<\/p>\n

McFadden CS<\/strong> (1999) Genetic and taxonomic relationships among Northeastern Atlantic and Mediterranean populations of the soft coral Alcyonium coralloides<\/em>. Marine Biology<\/em> 133: 171-184.<\/p>\n

McFadden CS<\/strong>, Donahue RM*, Hadland BK*, Weston R* (2001) A molecular phylogenetic analysis of reproductive trait evolution in the soft coral genus Alcyonium<\/em>. Evolution<\/em> 55: 29-42.<\/p>\n

S\u00e1nchez JA, McFadden CS<\/strong>, France SC, Lasker HR (2003) Phylogenetic analyses of shallow-water Caribbean octocorals. Marine Biology<\/em> 142: 975-987.<\/p>\n

McFadden CS<\/strong>, Hochberg FG (2003) Biology and taxonomy of encrusting alcyoniid soft corals in the northeastern Pacific Ocean with descriptions of two new genera (Cnidaria, Anthozoa, Octocorallia). Invertebrate Biology<\/em> 122: 93-113.<\/p>\n

McFadden CS<\/strong>, Hutchinson MB* (2004) Molecular evidence for the hybrid origin of species in the soft coral genus Alcyonium<\/em> (Cnidaria: Anthozoa: Octocorallia). Molecular Ecology<\/em> 13: 1495-1505.<\/p>\n

McFadden CS<\/strong>, Tullis ID*, Hutchinson MB*, Winner K*, Sohm JA* (2004) Variation in coding (NADH dehydrogenase subunits 2, 3 and 6) and non-coding intergenic spacer regions of the mitochondrial genome in Octocorallia (Cnidaria: Anthozoa). Marine Biotechnology<\/em> 6: 516-526.<\/p>\n

Collins AG, Cartwright P, McFadden CS<\/strong>, Schierwater B (2005) Phylogenetic context and basal metazoan model systems. Integrative and Comparative Biology<\/em> 45: 585-594.<\/p>\n

Knudsen B, Kohn AB, Nahir B*, McFadden<\/strong> CS<\/strong>, Moroz LL (2006) Complete DNA sequence of the mitochondrial genome of the sea-slug, Aplysia californica<\/em>: conservation of the gene order in Euthyneura. Molecular Phylogenetics and Evolution<\/em> 38: 459-469.<\/p>\n

McFadden CS<\/strong>, Alderslade P, Ofwegen LP van, Johnsen H*, Rusmevichientong A* (2006) Phylogenetic relationships within the tropical soft coral genera Sarcophyton<\/em> and Lobophytum<\/em> (Anthozoa, Octocorallia). Invertebrate Biology<\/em> 125: 288-305.<\/p>\n

McFadden CS<\/strong>, France SC, S\u00e1nchez JA, Alderslade P (2006) A molecular phylogenetic analysis of the Octocorallia (Coelenterata: Anthozoa) based on mitochondrial protein-coding sequences. Molecular Phylogenetics and Evolution<\/em> 41: 513-527.<\/p>\n

Alderslade P, McFadden CS<\/strong> (2007) Pinnule-less polyps: validation of the soft coral genus Acrossota<\/em> and a new genus and new species of Indo-Pacific Clavulariidae (Coelenterata: Octocorallia). Zootaxa<\/em> 1400: 27-44.<\/p>\n

Daly M, Brugler MR, Cartwright P, Collins AG, Dawson MN, Fautin DG, France SC, McFadden CS<\/strong>, Opresko DM, Rodriguez E, Romano S, Stake J (2007) The phylum Cnidaria: A review of phylogenetic patterns and diversity 300 years after Linnaeus. Pp. 127-182 in Zhang, Z-Q. and W.A. Shear (eds.), Linnaeus Tercentenary: Progress in Invertebrate Taxonomy<\/em>. Zootaxa<\/em> 1668: 1-766.<\/p>\n

McFadden CS<\/strong>, Ofwegen LP van, Beckman EJ*, Benayahu Y, Alderslade P (2009) Molecular systematics of the speciose Indo-Pacific soft coral genus, Sinularia<\/em> (Anthozoa: Octocorallia). Invertebrate Biology<\/em> 128: 303-323.<\/p>\n

Ofwegen LP van, McFadden CS<\/strong> (2010) A new family of octocorals from Cameroon waters. Journal of Natural History<\/em> 44: 23-29.<\/p>\n

McFadden<\/strong> CS<\/strong>, S\u00e1nchez JA, France SC (2010) Molecular phylogenetic insights into the evolution of Octocorallia: a review. Integrative and Comparative Biology<\/em> 50: 389-410.<\/p>\n

Parrin AP, Netherton SE, Bross LS, McFadden CS<\/strong>, Blackstone NW (2010) Circulation of fluids in the gastrovascular system of a stoloniferan octocoral. Biological Bulletin <\/em>219: 112-121.<\/p>\n

McFadden CS<\/strong>, Benayahu Y, Pante E, Thoma JN, Nevarez PA*, France SC (2011) Limitations of mitochondrial gene barcoding in Octocorallia. Molecular Ecology Resources<\/em> 11: 19-31.<\/p>\n

Benayahu Y, McFadden CS<\/strong> (2011) A new genus of soft coral of the family Alcyoniidae (Cnidaria, Octocorallia) with re-description of a new combination and description of a new species. Zookeys<\/em> 84: 1-11.<\/p>\n

Alderslade P, McFadden CS<\/strong> (2011) A new sclerite-free genus and species of Clavulariidae (Coelenterata: Octocorallia). Zootaxa<\/em> 3104: 64-68.<\/p>\n

Alderslade P, McFadden CS<\/strong> (2012) A new genus and species of the family Isididae from a CMAR Biodiversity study, and a discussion on the subfamilial placement of some nominal isidid genera (Coelenterata: Octocorallia). Zootaxa<\/em> 3154: 21-39.<\/p>\n

Pante E, France SC, Couloux A, Cruaud C, McFadden CS<\/strong>, Samadi S, Watling L (2012) Deep-sea origin and in-situ diversification of chrysogorgiid octocorals. PLoS One<\/em> 7(6): e38357<\/p>\n

McFadden CS<\/strong>, Ofwegen LP van (2012) A revision of the soft coral genus, Eunephthya<\/em> Verrill, 1869 (Anthozoa: Octocorallia: Nephtheidae), with a description of four new species from South Africa. Zootaxa<\/em> 3485: 1-25.<\/p>\n

Brockman SA*, McFadden CS (<\/strong>2012) The mitochondrial genome of Paraminabea aldersladei<\/em> (Cnidaria: Anthozoa: Octocorallia) supports intramolecular recombination as the primary mechanism of gene rearrangement in octocoral mitochondrial genomes. Genome Biology and Evolution<\/em> 4: 882-894.<\/p>\n

McFadden CS<\/strong>, Ofwegen LP van (2012) Stoloniferous octocorals (Anthozoa, Octocorallia) from South Africa, with descriptions of a new family of Alcyonacea, a new genus of Clavulariidae, and a new species of Cornularia<\/em> (Cornulariidae). Invertebrate Systematics<\/em> 26: 331-356.<\/p>\n

Ofwegen LP, Benayahu Y, McFadden CS<\/strong> (2013) Sinularia leptoclados<\/em> (Ehrenberg, 1834) (Cnidaria: Octocorallia) re-examined. ZooKeys <\/em>272: 29-59.<\/p>\n

McFadden CS<\/strong>, Ofwegen LP van (2013) A second, cryptic species of the soft coral genus Incrustatus<\/em> (Anthozoa: Octocorallia: Clavulariidae) from Tierra del Fuego, Argentina revealed by DNA barcoding. Helgoland Marine Research<\/em> 67: 137-147.<\/p>\n

Benayahu Y, Ofwegen LP van, Soong K, Dai C-F, Jeng M-S, Shlagman A, Hsieh HJ, McFadden CS<\/strong> (2013) Diversity and distribution of Octocorals (Coelenterata: Anthozoa) on the coral reefs of Penghu, Taiwan. Zoological Studies <\/em>51: 1529-1548.<\/p>\n

McFadden CS<\/strong>, Ofwegen LP van (2013) Molecular phylogenetic evidence supports a new family of octocorals and a new genus of Alcyoniidae (Octocorallia: Alcyonacea). ZooKeys<\/em> 346: 59-83.<\/p>\n

Haverkort-Yeh R, McFadden CS<\/strong>, Hal\u00e0sz A, Berumen M, Benayahu Y, Toonen RJ. (2013) A taxonomic survey of Saudi Arabian Red Sea octocorals (Cnidaria: Alcyonacea). Marine Biodiversity<\/em> 43: 279-291.<\/p>\n

Reijnen BT, McFadden CS<\/strong>, Hermanlimiento YT, Ofwegen LP van (2014) A molecular and morphological exploration of the generic boundaries in the family Melithaeidae (Coelenterata: Octocorallia) and its taxonomic consequences. Molecular Phylogenetics and Evolution <\/em>70: 383-401.<\/p>\n

Ruiz Allais JP, Hal\u00e0sz A, McFadden CS<\/strong>, Amaro ME, Benayahu Y (2014) The first incidence of an alien soft coral of the family Xeniidae in the Caribbean, an invasion in eastern Venezuelan coral communities. Coral Reefs<\/em> 33: 287.<\/p>\n

McFadden CS<\/strong>, Brown AS*<\/strong>, Brayton C*<\/strong>, Hunt CB*<\/strong>, Ofwegen LP van (2014) Application of DNA barcoding to biodiversity studies of shallow-water octocorals: molecular proxies agree with morphological estimates of species richness in Palau. Coral Reefs<\/em> 33: 275-286.<\/p>\n

Hal\u00e0sz A, McFadden CS<\/strong>, Aharonovich D, Toonen RJ, Benayahu Y (2014) A revision of the octocoral genus Ovabunda<\/em> (Alderslade, 2001) (Anthozoa, Octocorallia, Xeniidae). ZooKeys<\/em> 343: 1-41. doi: 10.3897\/zookeys.373.6511<\/p>\n

McFadden CS<\/strong>, Reynolds AM*<\/strong>, Janes MP (2014) DNA barcoding of xeniid soft corals (Octocorallia: Alcyonacea: Xeniidae) from Indonesia: species richness and phylogenetic relationships. Systematics & Biodiversity<\/em> 12: 247-257.<\/p>\n

Janes MP, McFadden CS<\/strong>, Chanmethakul T (2014) A new species of Ovabunda<\/em> (Octocorallia: Xeniidae) from the Andaman Sea, Thailand, with notes on the biogeography of this genus. ZooKeys <\/em>431: 1-17.<\/p>\n

Hal\u00e0sz A, Reynolds AM*<\/strong>, McFadden CS<\/strong>, Toonen RJ, Benayahu Y. (2014) Can polyp pulsation be the key to species boundaries in the genus Ovabunda <\/em>(Octocorallia: Alcyonacea: Xeniidae)? Hydrobiologia<\/em> doi: 10.1007\/s10750-014-2106-z<\/p>\n

Zapata F, Goetz F, Smith SA, Howison M, Siebert S, Church S, Sanders SM, Ames CL, McFadden CS<\/strong>, France SC, Daly M, Collins A, Haddock SHD, Dunn CW, Cartwright P. Phylogenomic analyses support traditional relationships within Cnidaria. PLoS One<\/em>, in press.<\/p>\n","protected":false},"excerpt":{"rendered":"

McFadden CS, McFarland MJ, Buss LW (1984) Biology of Hydractiniid hydroids. 1. Colony ontogeny in Hydractinia echinata (Flemming). Biological Bulletin […]<\/p>\n","protected":false},"author":1,"featured_media":0,"parent":462,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"","meta":{"_acf_changed":false,"footnotes":""},"class_list":["post-945","page","type-page","status-publish","hentry"],"acf":[],"_links":{"self":[{"href":"https:\/\/www.hmc.edu\/biology\/wp-json\/wp\/v2\/pages\/945","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/www.hmc.edu\/biology\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/www.hmc.edu\/biology\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/www.hmc.edu\/biology\/wp-json\/wp\/v2\/users\/1"}],"replies":[{"embeddable":true,"href":"https:\/\/www.hmc.edu\/biology\/wp-json\/wp\/v2\/comments?post=945"}],"version-history":[{"count":0,"href":"https:\/\/www.hmc.edu\/biology\/wp-json\/wp\/v2\/pages\/945\/revisions"}],"up":[{"embeddable":true,"href":"https:\/\/www.hmc.edu\/biology\/wp-json\/wp\/v2\/pages\/462"}],"wp:attachment":[{"href":"https:\/\/www.hmc.edu\/biology\/wp-json\/wp\/v2\/media?parent=945"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}